Name Revision Size Age Last Change
alignment 7910 3 months andreas: nicer formatting
biojava3-alignment 8213 2 weeks Mark Chapman: finished with linear space (anchored) alignments
biojava3-core 8215 1 week Mark Chapman: updated utilities to use generic types
biojava3-genome 8159 1 month Mark Chapman: refactored aligner, scorer, and refiner enum types
biojava3-phylo 8027 2 months andreas: target should not be in svn
biojava3-protmod 8219 7 days jgao: biojava3-protmod: better toString for ProteinModification.
biojava3-ws 8095 2 months foisys:
biosql 7610 5 months holland: Deepak's patch for exceptions.
blast 7917 3 months andreas: this module can now be uploaded to the BioJava mvn repository
bytecode 7543 6 months blivens: Merging the circular_permutations branch back into trunk. This adds a new alignment algorithm, 'j...
core 8187 3 weeks andreas: better logging if there is a problem
das 8011 2 months andreas: fixing encoding issue with umlaut
gui 8016 2 months andreas: fixing encoding issue with umlaut
phylo 7922 3 months andreas: this module can now be uploaded to the BioJava mvn repository
sequence 7921 3 months andreas: this module can now be uploaded to the BioJava mvn repository
sequencing 7918 3 months andreas: fixing access permission issue in junit tests
structure 8207 3 weeks andreas: replacing core dependency with new biojava3-core and biojava3-alignment dependencies
structure-gui 8208 3 weeks andreas: replacing core dependency with new biojava3-core and biojava3-alignment dependencies
LICENSE 7227 24.5K 1 year andreas: moving the last ant based trunk to a branch
ignore.txt 7227 48 12 months andreas: moving the last ant based trunk to a branch
pom.xml 8090 7.2K 2 months foisys:
readme.txt 7671 289 5 months andreas: updating to latest status