Name Revision Size Age Last Change
apps 4023 3 years holland: Removed redundant fields and methods, and fixed code where this showed up obvious bugs. Ended up ...
demos 7008 3 days foisys: First commit of a framework for submitting and retrieving BLAST requests on a remote server.
docs 3969 3 years mark_s: These images are now in the wiki. They are not needed here.
dtd 4830 12 months andreas: clarifying license for dtd
manifest 3972 3 years mark_s: updated manifest to use biojava-1.5-beta.jar
reports 4023 3 years holland: Removed redundant fields and methods, and fixed code where this showed up obvious bugs. Ended up ...
resources 4282 2 years gwaldon: Implementation of alternate tokenization
selfSignedCertificate 4172 2 years andreas: added a new task that signs biojava using jarsigner
src 7008 3 days foisys: First commit of a framework for submitting and retrieving BLAST requests on a remote server.
tests 6910 3 months andreas: less verbose parsing
.cvsignore 4203 80 2 years mark_s: updated to ignore some netbeans specific cruft
LICENSE 495 24.5K 9 years mrp: Licensing details.
LICENSE.COMMONS 2577 2.76K 6 years kdj: Added CLI classes
README 4261 2.98K 2 years andreas: updated the description how to build biojava to match the current build.xml
README.biosql 3967 2.48K 3 years mark_s: Updated for biojavax - hibernate
build.xml 4675 26.36K 1 year mark_s: added entries for new JUnit jar
bytecode.jar 2825 91.27K 6 years mrp: Documentation re synchronization and accessibility of visitor & walker classes. ProjectionEngine...
commons-cli.jar 2949 29.41K 6 years mrp: Fairly heavy re-factor of build.xml, with associated file renaming. Fixed an app that didn't com...
commons-collections-2.1.jar 3033 161.25K 6 years mrp: Added as binary.
commons-dbcp-1.1.jar 3041 98.41K 6 years mark_s: added now as binary, also fixed build.xml to point to them properly
commons-pool-1.1.jar 3041 38.6K 6 years mark_s: added now as binary, also fixed build.xml to point to them properly
jgrapht-jdk1.5.jar 4164 162.41K 2 years holland: Added JGraphT.
junit-4.4.jar 4674 157.69K 1 year mark_s: added JUnit JAR