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Date File Revision Author Revision Log
2008/08/03 03:52:04 294 294 lapp Fixed to work with the latest phylodb schema. Added ability to download from
ITIS website automatically. Simplified DSN construction and driver recognition.
2008/08/03 03:50:40 293 293 lapp Checking success of updating parent_taxon_IDs. Somewhat simplifying driver
recognition and DSN construction.
2008/08/01 18:36:32 288 288 lapp Fixed documentation in load_ncbi_taxonomy script. Added Changes items for this
release.
2008/08/01 17:15:52 287 287 lapp Fixed to no longer require the primary key for taxon nodes to be equal to the
NCBI taxonID.
2008/02/23 03:48:41 270 270 lapp Changed license to LGPL for phy* and other phylodb-dependent modules too.
2008/02/21 17:09:07 258 258 lapp Changing the license to LGPL v3.0.
2008/02/21 07:18:44 257 257 lapp This can't have possibly worked for years back, so surely this can't be needed.
2008/02/21 07:17:56 256 256 lapp Fixed filename, but I'll retire this anyway.
2007/10/23 20:21:44 245 245 jestill Added phymod.pl to biosql-schema.
2007/10/23 20:20:22 244 244 jestill Added phyreport.pl to biosql-schema.
2007/10/23 20:14:55 243 243 jestill Added phyopt.pl to biosql-schema.
2007/10/23 20:12:26 242 242 jestill Added phyexport.pl to biosql-schema.
2007/10/23 20:08:57 241 241 jestill Added phyimport.pl to biosql-schema.
2007/10/23 19:57:55 240 240 jestill Added phyinit.pl to biosql-schema.
2007/06/12 15:00:34 235 235 bosborne I had dbi:Pg:dbname=test set for Postgres so the script used this value instead of the argument to --driver. It should be the other way round, --driver should override any other value
2007/06/11 23:45:26 232 232 lapp Added documentation for --namespace option.
2007/06/11 23:44:14 231 231 lapp Added progress reporting. Fixed a bug in computing the nested set values.
2007/06/11 14:18:07 230 230 lapp Added ability to specify and set the client encoding. Added defaults drawn from
environment variables for dsn, user, and password.
2007/06/11 14:12:22 229 229 lapp Adding environment variable defaults for dsn, user, and password.
2007/06/11 11:26:27 228 228 lapp Added licence. Not sure why it wasn't there before.